Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400887.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4053.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8991

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
592--1717
171
6.6
172
75
6
665
35
14
11
35
1.81
3028--3336
170
1.9
160
86
6
356
35
13
8
38
1.76
2196--3410
171
7.1
170
76
3
596
35
13
9
37
1.78
4386--4740
172
2.1
170
78
3
399
34
12
11
38
1.80
6684--7834
171
6.7
171
78
6
1057
38
10
13
36
1.80
6972--7012
20
2.0
20
85
4
55
51
4
14
29
1.63
8664--8976
169
1.9
159
76
11
299
37
11
12
35
1.79

Tables:   1

The End!