Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018400942.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4102.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2018
ACGTcount: A:0.32, C:0.13, G:0.14, T:0.29

Warning! 219 characters in sequence are not A, C, G, or T


Found at i:168 original size:14 final size:14

Alignment explanation


    Indices: 149--175  Score: 54
    Period size: 14  Copynumber: 1.9  Consensus size: 14

        139 NNNATTCATT

                          
        149 TTTTCAATTTTTTA
          1 TTTTCAATTTTTTA

                         
        163 TTTTCAATTTTTT
          1 TTTTCAATTTTTT

        176 TCTTTTTATT


Statistics
Matches: 13,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   13  1.00

ACGTcount: A:0.19, C:0.07, G:0.00, T:0.74


Consensus pattern (14 bp):   
TTTTCAATTTTTTA
Done.