Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018400979.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_414.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12299

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1050--1699
171
3.8
170
77
5
648
38
13
16
32
1.87
3248--4324
171
6.3
167
73
8
532
32
15
13
37
1.86
3814--4321
170
3.1
158
80
10
477
31
14
15
34
1.88
5670--6256
171
3.4
170
78
4
545
33
15
13
36
1.86
6476--7994
171
8.9
170
73
8
875
32
15
13
37
1.86
9457--10015
171
3.3
169
79
4
575
38
14
15
31
1.87

Tables:   1

The End!