Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397629.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5117.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3692

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
243--465
117
1.9
117
91
0
365
37
17
7
37
1.78
1976--2309
171
2.0
161
73
16
320
35
14
10
36
1.80
1962--2555
172
3.5
170
73
7
465
34
14
10
38
1.80
2686--2995
172
1.8
170
85
2
442
37
12
10
40
1.77
2699--3589
170
5.2
169
74
6
629
35
12
10
36
1.78

Tables:   1

The End!