Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401018.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_418.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21043

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3872--5166
172
7.6
169
76
5
1074
35
12
14
37
1.85
3872--5160
343
3.8
340
78
6
1023
35
12
14
37
1.85
6074--7406
172
7.8
172
82
1
1550
37
14
13
34
1.85
6074--7406
342
3.9
340
81
3
1473
37
14
13
34
1.85
6077--7406
513
2.6
512
84
4
1778
37
14
13
34
1.85
15262--16372
170
6.5
169
77
7
1063
35
11
15
36
1.84
15456--16370
341
2.7
337
82
7
1036
35
11
15
36
1.84
15289--16358
511
2.1
513
82
4
1282
35
11
15
36
1.84
17270--17627
172
2.1
171
79
6
377
33
10
14
38
1.81

Tables:   1

The End!