Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018401163.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4314.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 729

Length: 1215
ACGTcount: A:0.24, C:0.08, G:0.07, T:0.21

Warning! 473 characters in sequence are not A, C, G, or T


Found at i:86 original size:10 final size:10

Alignment explanation


    Indices: 71--97  Score: 54
    Period size: 10  Copynumber: 2.7  Consensus size: 10

         61 CTGTTTTAAC

                      
         71 AAAAAATGTA
          1 AAAAAATGTA

                      
         81 AAAAAATGTA
          1 AAAAAATGTA

                   
         91 AAAAAAT
          1 AAAAAAT

         98 TTAACTTAAA


Statistics
Matches: 17,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  10   17  1.00

ACGTcount: A:0.74, C:0.00, G:0.07, T:0.19


Consensus pattern (10 bp):   
AAAAAATGTA
Done.