Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401200.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_435.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19114

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1887--2752
171
5.1
168
74
7
656
34
13
10
37
1.79
1887--2752
341
2.5
336
80
7
829
34
13
10
37
1.79
2937--3660
171
4.2
172
73
4
570
34
13
10
36
1.80
5041--6541
171
8.9
170
72
6
850
35
12
11
35
1.80
6341--6381
21
2.0
21
85
4
57
46
7
14
31
1.72
7917--8256
171
2.0
171
82
3
416
36
13
10
39
1.79
9924--10249
170
2.0
160
83
1
330
35
11
11
35
1.77
10130--10440
171
1.9
160
84
6
342
35
13
11
36
1.82
13026--13386
171
2.1
163
78
9
355
36
13
9
35
1.76
15290--15948
171
4.0
161
71
16
366
35
14
11
35
1.82
17391--17972
314
1.9
314
81
2
720
35
9
14
37
1.79
17698--18857
171
6.8
171
72
8
513
34
10
13
36
1.79
18160--18567
170
2.4
169
81
4
500
38
10
12
37
1.76
18410--18738
170
2.0
159
83
6
326
35
10
15
35
1.82

Tables:   1

The End!