Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018401286.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4429.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 905

Length: 1509
ACGTcount: A:0.15, C:0.08, G:0.08, T:0.18

Warning! 758 characters in sequence are not A, C, G, or T


Found at i:359 original size:11 final size:11

Alignment explanation


    Indices: 339--368  Score: 51
    Period size: 11  Copynumber: 2.7  Consensus size: 11

        329 ATAATTAAAA

                 *     
        339 TATTAATATTT
          1 TATTATTATTT

                       
        350 TATTATTATTT
          1 TATTATTATTT

                    
        361 TATTATTA
          1 TATTATTA

        369 AAAAATATAA


Statistics
Matches: 18,  Mismatches: 1, Indels: 0
        0.95            0.05        0.00

Matches are distributed among these distances:
  11   18  1.00

ACGTcount: A:0.33, C:0.00, G:0.00, T:0.67


Consensus pattern (11 bp):   
TATTATTATTT
Done.