Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401395.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4524.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7096

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
110--372
142
1.9
141
83
5
343
41
12
12
33
1.81
251--1145
170
5.3
169
80
6
837
38
10
14
36
1.81
1022--1275
140
1.8
141
84
2
350
35
13
12
38
1.83
1249--2492
342
3.6
338
77
8
889
39
11
13
33
1.81
1147--2632
170
8.7
168
73
8
934
38
11
13
34
1.81
4953--5303
170
2.1
171
82
2
420
34
14
12
38
1.84
6382--6725
172
2.1
161
74
15
340
36
12
13
34
1.83
6209--7096
171
5.2
171
74
6
631
37
10
13
34
1.80

Tables:   1

The End!