Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401405.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4533.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11628

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--2550
171
15.0
170
75
5
1846
38
13
13
34
1.84
1--2550
341
7.5
340
77
6
1953
38
13
13
34
1.84
2631--3789
340
3.4
342
74
6
805
38
12
12
36
1.82
2631--3840
171
7.1
170
74
6
1005
38
12
12
36
1.82
4050--4481
171
2.5
170
80
4
447
39
12
12
34
1.82
4755--5554
171
4.7
170
71
6
492
37
12
13
35
1.83
5680--9184
171
20.5
170
73
5
2093
36
12
13
35
1.83
5684--9184
341
10.3
337
72
7
1773
36
12
13
35
1.83
4755--11628
512
13.5
512
76
6
3510
36
12
13
34
1.82
9069--9329
141
1.8
141
84
3
353
40
11
11
36
1.78
9269--9673
172
2.4
172
81
4
469
38
12
14
34
1.83
9253--9673
171
2.5
171
80
4
481
39
12
13
34
1.83
9727--11628
171
11.2
170
81
5
2033
38
12
14
35
1.83

Tables:   1

The End!