Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401596.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4717.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6772

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
699--1118
170
2.5
170
83
2
488
34
12
11
37
1.78
1223--3311
171
12.2
170
74
5
1249
35
11
13
34
1.81
1884--3127
682
1.9
656
80
4
1275
34
11
14
34
1.82
2001--2958
511
1.9
490
81
4
977
34
12
14
34
1.83
3756--5547
171
10.5
169
71
5
884
35
12
11
35
1.79
4201--4830
341
1.9
330
81
4
678
34
13
10
38
1.79
4579--4630
19
2.9
19
78
18
58
32
5
7
53
1.53
4583--4631
15
2.8
17
80
19
57
32
4
8
55
1.48
6214--6772
170
3.3
169
85
4
723
36
13
12
37
1.83

Tables:   1

The End!