Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401632.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_475.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22774

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2399--2707
171
1.8
171
83
5
410
35
13
11
39
1.81
6222--6311
45
2.0
44
85
6
119
31
6
5
56
1.48
6567--7591
170
6.0
169
74
7
738
37
11
13
34
1.80
7114--7436
168
2.0
159
79
9
337
38
9
13
34
1.78
8501--9227
171
4.3
170
72
6
447
34
14
10
34
1.81
9820--10141
172
1.9
161
82
7
321
37
12
11
35
1.79
10245--10630
171
2.3
170
84
5
492
35
13
10
40
1.79
19562--19884
171
1.9
161
82
5
312
36
13
11
35
1.80
20260--20795
171
3.2
167
75
7
463
34
13
11
38
1.82
20669--20703
18
1.9
18
88
0
52
51
8
20
20
1.73

Tables:   1

The End!