Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018401688.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4802.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 879

Length: 1465
ACGTcount: A:0.32, C:0.17, G:0.20, T:0.31


Found at i:291 original size:11 final size:11

Alignment explanation


    Indices: 277--301  Score: 50
    Period size: 11  Copynumber: 2.3  Consensus size: 11

        267 TTTGTCTTTA

                       
        277 TTTTTTAAAAT
          1 TTTTTTAAAAT

                       
        288 TTTTTTAAAAT
          1 TTTTTTAAAAT

               
        299 TTT
          1 TTT

        302 ACCCTTGTAA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   14  1.00

ACGTcount: A:0.32, C:0.00, G:0.00, T:0.68


Consensus pattern (11 bp):   
TTTTTTAAAAT
Done.