Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018401793.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_4902.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 712

Length: 1187
ACGTcount: A:0.32, C:0.20, G:0.23, T:0.26


Found at i:1164 original size:2 final size:2

Alignment explanation


    Indices: 1157--1187  Score: 62
    Period size: 2  Copynumber: 15.5  Consensus size: 2

       1147 CGATCAGGGG

                                                          
       1157 GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA G
          1 GA GA GA GA GA GA GA GA GA GA GA GA GA GA GA G


Statistics
Matches: 29,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
   2   29  1.00

ACGTcount: A:0.48, C:0.00, G:0.52, T:0.00


Consensus pattern (2 bp):   
GA

Done.