Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397716.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1015.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24331

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1362
171
8.1
170
78
6
1249
39
11
13
35
1.81
9948--10310
171
2.1
172
79
5
378
36
12
12
38
1.81
10772--11986
171
7.1
170
77
4
1039
38
11
13
35
1.81
10928--11986
510
2.1
512
81
6
1232
39
12
12
35
1.80
13342--14520
170
6.9
170
81
5
1280
39
12
13
35
1.82
14841--14989
79
1.9
79
83
2
192
36
14
10
37
1.81
14912--16758
171
10.8
171
80
3
1843
37
12
13
35
1.82
14920--16758
514
3.6
508
81
5
1727
37
12
13
35
1.82
17508--17881
171
2.2
171
77
2
403
38
9
14
34
1.79
19558--20511
171
5.6
170
76
2
829
37
10
13
35
1.80
19558--20452
341
2.6
332
77
7
714
38
10
13
35
1.79
20893--21203
171
1.8
171
85
4
439
37
12
13
36
1.84

Tables:   1

The End!