Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397724.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1022.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14879

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
7194--7233
16
2.6
16
92
4
64
30
7
5
57
1.48
7354--7410
16
3.3
16
75
15
60
35
3
7
54
1.45
7296--7723
172
2.5
171
81
2
491
35
13
11
39
1.82
8506--9637
171
6.7
171
71
8
657
33
12
13
35
1.84
10474--11579
171
6.5
171
77
5
909
35
13
13
36
1.84
10482--11579
342
3.2
340
77
5
1061
35
13
13
36
1.84
10652--11576
513
1.8
513
83
5
1242
35
13
13
36
1.85
11720--12045
171
1.9
171
82
5
408
35
12
14
36
1.85
14071--14392
171
1.9
161
81
5
301
33
11
14
37
1.83

Tables:   1

The End!