Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018401978.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5075.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7518

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
394--949
169
3.3
170
79
2
596
36
12
15
33
1.85
1441--2208
168
4.5
169
78
4
650
36
11
12
36
1.81
1566--2208
340
1.9
331
81
5
774
36
11
13
36
1.82
2305--3998
172
9.9
171
72
6
1035
38
12
12
33
1.81
2306--3998
342
5.0
339
73
7
1129
38
12
12
33
1.81
4064--4484
170
2.5
171
83
4
510
36
13
11
36
1.81
5537--6391
172
5.0
167
72
9
525
37
12
13
33
1.82
6529--7424
171
5.2
170
80
4
917
38
13
13
33
1.84

Tables:   1

The End!