Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018402007.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5103.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 655

Length: 1093
ACGTcount: A:0.14, C:0.20, G:0.19, T:0.20

Warning! 291 characters in sequence are not A, C, G, or T


Found at i:207 original size:15 final size:15

Alignment explanation


    Indices: 187--216  Score: 51
    Period size: 15  Copynumber: 2.0  Consensus size: 15

        177 AGCCATCCTG

                           
        187 CGTGCCGCGCACCTA
          1 CGTGCCGCGCACCTA

                     *     
        202 CGTGCCGCGTACCTA
          1 CGTGCCGCGCACCTA

        217 TGGCGTGCGG


Statistics
Matches: 14,  Mismatches: 1, Indels: 0
        0.93            0.07        0.00

Matches are distributed among these distances:
  15   14  1.00

ACGTcount: A:0.13, C:0.43, G:0.27, T:0.17


Consensus pattern (15 bp):   
CGTGCCGCGCACCTA
Done.