Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397733.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1031.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39197

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
10529--11066
170
3.2
169
78
5
552
34
15
10
38
1.81
13470--13782
170
1.9
160
78
10
326
36
13
9
37
1.77
15157--15477
170
1.9
160
84
3
342
37
13
9
36
1.77
19864--20174
170
1.9
154
76
13
286
36
10
13
34
1.79
23308--23925
174
3.6
171
74
4
483
37
11
11
33
1.79
25424--27246
171
10.7
171
79
4
1766
37
11
14
35
1.82
31745--31892
51
2.9
51
87
0
206
35
22
7
35
1.82
33073--33720
170
3.8
170
78
5
396
39
9
12
35
1.77
33832--34606
171
4.5
166
76
5
640
34
10
15
35
1.82
33832--34613
341
2.3
331
79
8
707
34
10
15
35
1.82
38807--39197
170
2.3
171
78
3
437
36
11
14
34
1.82

Tables:   1

The End!