Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402062.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_516.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13762

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
144--527
172
2.2
172
81
6
431
36
10
13
39
1.80
1026--2980
170
11.5
170
71
7
1135
38
10
12
33
1.78
1026--2973
511
3.8
511
76
6
1285
38
10
12
33
1.78
3677--4232
171
3.3
168
79
5
528
37
11
13
35
1.81
3820--4236
171
2.4
170
84
4
529
36
10
14
37
1.81
5459--5844
169
2.3
171
84
3
481
41
8
14
34
1.77
5943--8746
171
16.4
170
74
6
1879
37
10
14
34
1.80
9365--10121
172
4.4
170
76
5
603
33
14
10
39
1.80
9365--10004
344
1.9
343
83
2
827
34
14
10
38
1.82
10661--11231
172
3.3
172
86
2
738
35
12
10
40
1.78
13305--13759
172
2.6
172
81
3
556
40
11
13
34
1.80

Tables:   1

The End!