Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402105.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_52.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35315

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3899--5049
172
6.7
172
84
2
1213
36
12
12
37
1.81
3899--5032
343
3.3
337
81
4
1195
36
12
12
38
1.81
5160--5523
172
2.1
172
79
3
383
36
13
13
37
1.84
17432--18209
171
4.5
172
76
2
729
36
11
13
34
1.81
21078--22911
172
10.7
171
77
6
1086
36
13
13
36
1.84
20913--22981
344
6.0
343
81
3
1804
36
13
13
35
1.84
21079--22911
516
3.5
506
76
7
1481
36
13
13
36
1.84
23760--24251
173
2.9
162
74
12
391
36
12
11
34
1.80
23917--24353
173
2.6
162
75
13
360
35
12
10
36
1.79

Tables:   1

The End!