Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402195.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5283.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4868

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
424--948
171
3.1
168
80
7
545
34
15
11
37
1.84
1070--2091
171
6.0
171
74
4
763
35
12
10
37
1.78
3240--4075
171
4.9
169
73
6
643
33
13
13
37
1.83
3437--4075
342
1.9
331
82
3
712
33
13
13
36
1.84
4443--4868
171
2.5
168
79
10
429
37
10
11
40
1.76

Tables:   1

The End!