Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402212.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_53.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23656

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2610--2687
41
1.9
41
89
0
120
46
10
16
26
1.79
4726--5291
173
3.3
171
78
6
590
39
12
12
36
1.81
6004--6600
171
3.5
171
77
3
452
37
11
12
34
1.80
10405--10836
168
2.5
170
83
3
512
40
10
12
37
1.77
18333--18751
173
2.4
169
81
4
464
42
10
11
32
1.76
20179--20512
173
2.0
162
76
12
304
36
10
13
36
1.78

Tables:   1

The End!