Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018402237.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5322.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 2491
ACGTcount: A:0.26, C:0.16, G:0.08, T:0.26

Warning! 580 characters in sequence are not A, C, G, or T


Found at i:63 original size:11 final size:11

Alignment explanation


    Indices: 47--71  Score: 50
    Period size: 11  Copynumber: 2.3  Consensus size: 11

         37 TTTAATAAGA

                       
         47 TATTATTATTT
          1 TATTATTATTT

                       
         58 TATTATTATTT
          1 TATTATTATTT

               
         69 TAT
          1 TAT

         72 CGCATAAGAA


Statistics
Matches: 14,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  11   14  1.00

ACGTcount: A:0.28, C:0.00, G:0.00, T:0.72


Consensus pattern (11 bp):   
TATTATTATTT
Done.