Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402287.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_537.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21830

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4212--5055
171
4.9
171
81
5
893
40
11
12
34
1.80
5956--5981
12
2.2
12
100
0
52
23
46
0
30
1.53
11083--14571
171
20.5
168
76
6
2705
39
12
13
34
1.83
11102--14571
341
10.2
340
80
4
3414
39
12
13
34
1.83
15014--18120
170
18.3
170
77
5
2828
39
12
13
33
1.83
15014--18120
341
9.1
338
78
6
2857
39
12
13
33
1.83
18591--19293
171
4.2
170
77
5
656
38
11
14
35
1.83
18609--19908
171
7.9
164
70
14
653
38
11
14
34
1.83
19145--19438
148
2.0
147
83
3
367
38
12
14
34
1.84
18658--19908
643
1.9
656
83
4
1636
38
12
14
34
1.84
19538--19926
172
2.3
170
77
8
417
35
12
15
36
1.85
20031--20830
171
4.7
170
79
5
801
39
12
14
33
1.83
20861--21830
171
5.7
171
79
5
944
40
12
12
34
1.81
20861--21830
343
2.8
337
81
4
1093
40
12
12
34
1.81

Tables:   1

The End!