Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402307.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_539.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11132

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
420--506
39
2.2
38
84
11
106
2
43
12
41
1.55
993--1039
19
2.5
19
87
12
71
29
0
0
70
0.88
993--1038
24
2.0
23
91
4
74
28
0
0
71
0.86
1238--1275
16
2.4
16
91
4
60
44
0
0
55
0.99
1311--1345
18
1.9
18
88
0
52
37
0
5
57
1.23
3300--3341
21
2.0
21
81
9
50
19
33
26
21
1.97

Tables:   1

The End!