Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402319.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_540.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8219

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
276--1140
171
5.1
170
73
5
587
33
13
12
36
1.83
1293--2830
171
9.0
169
79
5
1319
37
12
13
35
1.84
1856--2170
167
1.9
167
83
1
407
36
13
13
36
1.84
1313--2493
509
2.3
510
79
5
1258
37
13
13
35
1.84
5312--6462
171
6.7
169
81
4
1112
35
14
12
37
1.84
5312--6462
342
3.4
340
81
4
1242
35
14
12
37
1.84
6631--6951
171
1.9
161
81
6
301
36
11
14
34
1.82
7584--7623
21
1.9
21
84
0
53
22
15
17
45
1.85
7428--7972
171
3.2
168
80
7
526
36
13
13
35
1.83

Tables:   1

The End!