Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402346.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5427.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4434

Tables:   1   

This is table  1  of  1  ( 4 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
187--504
170
1.9
159
79
3
185
34
11
11
38
1.78
1824--2136
169
1.9
159
82
3
306
37
13
8
38
1.74
2810--3134
171
2.0
160
79
8
339
35
14
9
37
1.79
4006--4434
171
2.5
172
77
6
449
36
13
11
36
1.81

Tables:   1

The End!