Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402412.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5491.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1042

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
75--110
18
2.0
18
89
10
56
22
52
19
5
1.66
76--137
27
2.3
27
81
13
74
22
46
22
8
1.78
76--137
18
3.4
19
79
16
53
22
46
22
8
1.78
204--381
36
4.9
35
74
11
128
7
47
34
10
1.65
260--320
18
3.4
18
77
8
70
3
50
36
9
1.52
242--389
36
4.1
36
80
5
156
8
47
33
10
1.67
484--515
9
3.6
9
100
0
64
0
31
34
34
1.58
484--523
18
2.2
18
90
0
62
0
32
35
32
1.58
660--703
21
2.1
21
91
0
70
9
31
50
9
1.65

Tables:   1

The End!