Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402452.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_553.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  12900

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
118--481
172
2.1
172
80
3
394
39
13
12
34
1.82
4550--5527
170
5.8
168
76
7
753
38
12
14
35
1.83
4476--5580
171
6.5
168
76
6
888
37
12
13
36
1.83
4550--5580
513
2.0
507
79
4
1110
38
12
13
35
1.83
10585--10739
73
2.1
73
82
4
188
35
13
22
28
1.92

Tables:   1

The End!