Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397795.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1094.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28838

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--362
172
2.1
171
84
2
476
38
11
13
36
1.81
541--1043
171
2.9
169
84
7
642
38
10
12
37
1.78
1144--2783
344
4.8
338
81
4
1608
39
11
12
36
1.78
1144--2784
171
9.6
171
79
5
1443
39
11
12
36
1.78
3193--3942
172
4.4
172
75
7
607
39
10
13
34
1.78
5161--5829
171
3.9
168
75
8
525
33
13
11
38
1.80
5441--5829
169
2.3
167
79
10
414
34
15
11
38
1.84
6260--6606
171
2.0
172
83
3
441
39
11
13
36
1.80
7169--7493
171
2.0
160
76
13
302
37
11
13
34
1.81
12282--12766
171
2.9
162
78
10
379
35
10
13
35
1.80
12625--12936
171
1.9
155
83
4
263
36
10
10
36
1.76
18203--18533
171
2.0
161
79
10
355
40
10
12
33
1.78

Tables:   1

The End!