Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018402923.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_5970.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 990

Length: 1650
ACGTcount: A:0.32, C:0.18, G:0.20, T:0.30

Warning! 10 characters in sequence are not A, C, G, or T


Found at i:360 original size:14 final size:14

Alignment explanation


    Indices: 341--374  Score: 68
    Period size: 14  Copynumber: 2.4  Consensus size: 14

        331 AATACTTAGT

                          
        341 AATGATTAATTAAA
          1 AATGATTAATTAAA

                          
        355 AATGATTAATTAAA
          1 AATGATTAATTAAA

                  
        369 AATGAT
          1 AATGAT

        375 ATAGATGTTT


Statistics
Matches: 20,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  14   20  1.00

ACGTcount: A:0.56, C:0.00, G:0.09, T:0.35


Consensus pattern (14 bp):   
AATGATTAATTAAA
Done.