Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402940.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_600.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  22576

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2857--3179
171
1.9
161
77
10
319
35
13
9
37
1.78
5407--5957
171
3.2
170
78
7
513
36
14
11
38
1.82
6542--7538
341
2.9
341
76
9
830
36
13
12
37
1.83
6544--7538
171
5.8
170
78
6
845
36
13
12
37
1.83
7677--8359
170
4.0
168
74
7
551
35
13
10
38
1.79
8973--9012
20
2.0
21
90
5
64
45
5
7
42
1.54
9746--12324
171
15.1
171
76
7
1809
37
11
13
34
1.82
9746--12324
340
7.6
338
76
8
1820
37
11
13
34
1.82
9746--12323
511
5.0
510
78
7
2123
37
11
13
34
1.82
14076--15790
171
10.0
171
76
8
1303
35
14
11
38
1.82
14076--15790
341
5.0
341
76
8
1418
35
14
11
38
1.82
16197--16742
171
3.2
171
79
7
514
38
12
14
33
1.83
18530--19224
171
4.1
170
76
4
540
37
10
14
34
1.81
20355--21387
170
6.0
169
71
4
545
35
11
13
33
1.81

Tables:   1

The End!