Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018402941.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_601.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 865

Length: 1442
ACGTcount: A:0.17, C:0.06, G:0.06, T:0.17

Warning! 775 characters in sequence are not A, C, G, or T


Found at i:1366 original size:21 final size:21

Alignment explanation


    Indices: 1340--1379  Score: 80
    Period size: 21  Copynumber: 1.9  Consensus size: 21

       1330 NNNNNNNNNN

                                 
       1340 AATGAATGCTTTTTTCTTCTC
          1 AATGAATGCTTTTTTCTTCTC

                               
       1361 AATGAATGCTTTTTTCTTC
          1 AATGAATGCTTTTTTCTTC

       1380 ATGTTTATCA


Statistics
Matches: 19,  Mismatches: 0, Indels: 0
        1.00            0.00        0.00

Matches are distributed among these distances:
  21   19  1.00

ACGTcount: A:0.20, C:0.17, G:0.10, T:0.53


Consensus pattern (21 bp):   
AATGAATGCTTTTTTCTTCTC
Done.