Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402947.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_608.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29998

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--1388
171
8.1
172
73
6
806
36
10
12
35
1.78
2052--2089
20
1.9
20
89
10
60
39
7
5
47
1.55
3420--3748
171
2.0
161
80
3
295
37
11
11
36
1.77
4613--5381
171
4.5
168
76
6
527
37
10
13
35
1.79
5073--5388
172
1.8
173
84
2
438
38
9
13
37
1.77
6832--7154
169
1.9
168
80
6
375
40
11
13
34
1.80
6996--7318
170
2.0
160
80
9
366
36
8
14
36
1.78
7523--7562
21
1.9
21
85
10
55
42
2
22
32
1.67
11141--11687
170
3.2
160
72
12
348
36
12
8
38
1.74
12576--12995
171
2.5
171
77
7
467
38
10
13
37
1.79
13063--13651
171
3.5
167
77
10
577
39
10
12
37
1.78
18225--18546
171
2.0
156
85
3
324
34
13
9
37
1.78
17730--18637
170
5.3
170
77
4
803
35
13
10
38
1.79
18677--18856
97
1.9
97
87
0
270
40
16
13
30
1.87
28514--28906
170
2.3
169
80
3
396
35
14
12
35
1.84

Tables:   1

The End!