Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397823.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1125.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18843

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9--554
172
3.2
169
74
4
486
39
11
12
33
1.79
1115--1500
171
2.3
171
81
2
427
38
12
11
34
1.79
5476--6520
171
6.2
171
70
8
697
36
11
13
34
1.80
7862--8554
342
2.0
341
82
5
855
37
11
13
37
1.81
7814--8566
171
4.4
170
79
5
750
35
12
13
38
1.82
16666--17057
171
2.3
171
80
3
403
35
14
13
34
1.85

Tables:   1

The End!