Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402960.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_621.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21525

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1418--1468
20
2.5
20
93
0
84
50
5
9
33
1.59
2394--2805
171
2.4
170
78
4
445
36
11
13
36
1.81
4348--4709
171
2.1
171
84
1
456
39
9
11
36
1.75
9796--10109
171
1.9
161
77
6
322
37
14
9
34
1.80
12598--13364
171
4.5
169
76
5
760
35
11
12
37
1.79
13468--14508
171
6.1
170
77
4
871
38
11
12
35
1.78
13468--14508
341
3.1
339
79
3
995
38
11
12
35
1.78
18222--18544
171
1.9
171
86
1
459
39
11
13
36
1.80

Tables:   1

The End!