Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402979.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_644.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  49972

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3575--3958
170
2.2
172
81
6
433
36
12
9
40
1.76
10656--11122
171
2.7
170
76
2
477
34
15
11
36
1.83
20584--21391
171
4.7
170
75
4
683
35
11
12
36
1.80
21492--21815
171
1.9
162
81
6
309
36
11
13
35
1.81
22313--22835
171
3.1
169
70
7
446
36
10
13
35
1.80
30835--30865
15
2.1
15
93
0
53
32
0
3
64
1.09
32605--32648
19
2.3
19
96
0
79
20
34
11
34
1.88
38933--39287
171
2.1
170
81
3
408
36
16
8
36
1.79
46201--46889
171
4.0
170
74
5
564
36
10
13
37
1.78
46964--47468
171
3.0
171
78
4
444
39
10
14
35
1.80
46959--47563
171
3.5
169
78
5
430
39
11
13
35
1.80
49075--49114
21
2.0
21
85
9
57
30
17
7
45
1.76

Tables:   1

The End!