Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018402988.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_653.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53153

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5091--5514
171
2.5
170
80
3
422
37
10
14
33
1.82
11839--12402
171
3.3
171
76
5
449
37
12
14
34
1.84
13006--13475
172
2.7
171
78
4
498
35
14
12
35
1.84
19972--20360
171
2.3
171
81
4
453
36
15
11
37
1.83
23820--23860
21
2.0
21
85
9
57
46
7
19
26
1.76
39877--40208
173
1.9
172
87
1
486
34
14
11
37
1.81
50583--51104
172
3.1
172
75
5
527
37
14
12
33
1.84

Tables:   1

The End!