Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397827.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1129.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15504

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4774--4820
17
2.6
17
83
6
58
31
4
0
63
1.13
5592--5650
28
2.1
28
100
0
118
55
10
13
20
1.66
7033--7500
170
2.7
171
80
3
514
32
12
15
39
1.85
6965--7522
171
3.3
169
78
4
559
33
12
16
37
1.86
8439--8795
171
2.1
170
83
4
443
32
13
15
38
1.86
8898--10649
171
10.2
168
76
5
1240
38
12
13
33
1.83
8898--10241
171
7.9
169
80
6
1264
38
14
13
33
1.85
8930--10241
512
2.6
510
81
5
1446
38
14
12
33
1.85
10556--10588
17
1.9
17
88
11
50
63
0
3
33
1.10
12676--12987
170
1.8
170
86
2
448
31
15
16
36
1.90

Tables:   1

The End!