Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403001.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_668.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20392

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
871--1340
172
2.7
171
84
1
559
36
15
13
32
1.86
936--1435
170
3.0
160
80
8
373
36
14
13
33
1.85
1752--2637
172
5.2
170
80
4
903
36
16
12
35
1.86
1752--2637
170
5.2
170
80
5
887
36
16
12
35
1.86
2582--2692
55
2.0
55
96
0
204
36
20
8
34
1.82
11183--12127
172
5.5
171
79
5
997
36
11
14
36
1.83
12699--13352
172
3.8
172
75
7
504
35
13
13
36
1.84
13728--14224
168
2.9
171
72
6
452
36
14
11
35
1.82
15984--17447
171
8.5
171
79
4
1430
36
12
14
35
1.84
18865--19215
172
2.0
172
84
2
454
37
12
13
36
1.83

Tables:   1

The End!