Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403065.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_73.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29502

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4665--5670
171
5.9
169
75
3
784
35
15
13
34
1.87
7197--8146
171
5.6
168
77
6
871
35
14
15
35
1.87
7224--8137
341
2.7
339
78
6
907
35
14
15
35
1.87
7195--8197
512
2.0
511
89
2
1530
34
14
15
35
1.88
9997--10443
171
2.6
171
81
4
476
37
14
15
32
1.87
10321--10558
132
1.8
131
80
7
293
38
13
12
36
1.81
14666--14988
170
1.9
170
82
2
407
34
14
16
34
1.90
15847--16110
132
2.0
132
81
4
309
37
14
12
35
1.85
17816--18990
510
2.3
510
86
1
1622
36
14
14
34
1.86
17806--18990
340
3.5
335
74
6
997
36
14
14
35
1.86
17814--18990
171
6.9
168
73
7
876
36
14
14
35
1.86
26357--27838
170
8.7
170
76
5
1222
34
14
14
35
1.87
26485--27835
512
2.6
510
85
2
1773
34
14
14
35
1.87

Tables:   1

The End!