Tandem Repeats Finder Program written by:

                 Gary Benson
      Program in Bioinformatics
          Boston University

Version 4.09

Sequence: NW_018403101.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_766.0, whole genome shotgun sequence

Parameters: 2 7 7 80 10 50 1000

Pmatch=0.80,Pindel=0.10
tuple sizes 0,4,5,7
tuple distances 0, 29, 159, 1000

Length: 3706
ACGTcount: A:0.21, C:0.07, G:0.07, T:0.20

Warning! 1680 characters in sequence are not A, C, G, or T


Found at i:321 original size:17 final size:17

Alignment explanation


    Indices: 295--327  Score: 57
    Period size: 17  Copynumber: 1.9  Consensus size: 17

        285 ATAACCTCAA

                             
        295 AATTTATTTATATTTTG
          1 AATTTATTTATATTTTG

                 *          
        312 AATTTTTTTATATTTT
          1 AATTTATTTATATTTT

        328 TTATTAAAAC


Statistics
Matches: 15,  Mismatches: 1, Indels: 0
        0.94            0.06        0.00

Matches are distributed among these distances:
  17   15  1.00

ACGTcount: A:0.27, C:0.00, G:0.03, T:0.70


Consensus pattern (17 bp):   
AATTTATTTATATTTTG
Done.