Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403135.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_801.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3997

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--426
171
2.5
169
82
4
507
38
11
13
36
1.81
994--2438
171
8.4
171
79
4
1304
37
12
14
34
1.84
994--2438
513
2.8
510
80
3
1510
37
12
14
34
1.84
2180--2713
291
1.8
291
84
2
741
40
11
15
32
1.84
2442--3020
171
3.4
170
82
4
648
38
12
13
34
1.84
1993--2897
462
2.0
462
82
5
1134
39
12
14
34
1.83
2766--3989
320
3.8
313
76
12
941
37
12
13
35
1.84
3052--3707
171
3.9
167
78
8
623
37
12
13
36
1.83
2626--3531
491
1.8
489
83
4
1180
37
12
14
35
1.84
3565--3838
138
2.0
138
83
5
349
38
11
11
37
1.78

Tables:   1

The End!