Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403141.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_808.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24322

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8422--8758
171
2.0
171
83
2
426
39
11
11
34
1.78
9016--9653
171
3.7
171
75
6
585
37
12
13
34
1.83
9027--9653
342
1.9
331
82
6
712
37
12
13
34
1.83
15412--16405
171
5.8
171
71
7
583
36
10
13
34
1.79
15554--16556
512
2.0
491
82
3
978
35
10
13
33
1.80
18410--18775
170
2.1
171
79
8
406
36
13
12
37
1.82
18878--19410
169
3.1
167
78
4
584
37
10
13
36
1.79
18878--19537
169
3.9
171
78
4
487
36
10
13
35
1.80
20249--20304
22
2.5
22
94
0
94
60
12
3
23
1.47
21245--22089
171
4.9
171
73
4
634
35
11
13
34
1.80

Tables:   1

The End!