Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403234.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_904.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35713

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
104--494
171
2.3
170
81
5
441
35
14
12
35
1.84
2550--3320
170
4.5
169
76
4
633
37
13
13
32
1.84
4121--4446
172
1.9
163
77
9
325
34
15
14
32
1.87
8648--9090
172
2.6
170
80
3
478
38
15
12
33
1.86
17134--18295
171
6.8
169
72
9
563
34
12
12
37
1.81
20892--21534
171
3.8
168
76
6
582
36
11
13
35
1.81
21780--22239
172
2.7
169
76
7
466
36
14
12
35
1.84
22484--22956
172
2.8
171
81
3
540
34
14
11
37
1.82
23525--24294
171
4.5
169
76
4
720
33
13
12
38
1.82
26523--26948
171
2.5
171
75
4
428
33
13
12
38
1.82
28363--28700
171
2.0
170
81
6
398
31
14
12
38
1.84
29351--29680
168
2.0
159
73
10
141
36
13
10
39
1.80
29173--29807
171
3.7
169
76
8
402
36
13
11
35
1.81
29829--30392
171
3.3
171
75
5
410
34
11
13
37
1.81
30014--30410
173
2.3
172
78
6
419
33
10
14
39
1.80
34165--34963
171
4.7
171
72
7
616
34
14
11
37
1.81

Tables:   1

The End!