Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403237.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_907.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16454

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
678--1405
172
4.2
171
73
3
503
34
13
12
35
1.83
3315--5614
172
13.4
170
70
6
1277
35
11
14
34
1.82
3322--5614
343
6.7
343
74
3
1791
35
11
13
34
1.82
7374--9633
172
13.2
172
77
4
2046
37
12
13
35
1.83
7377--9568
343
6.4
341
80
4
2444
37
12
14
35
1.84
7377--9633
686
3.3
676
85
3
2723
37
12
14
35
1.83
9324--9366
21
2.0
21
86
0
59
30
13
11
44
1.80
10411--11264
344
2.5
343
79
5
904
35
13
13
37
1.84
10411--11251
172
4.9
170
77
7
723
36
13
12
37
1.84
13228--13723
172
2.9
170
76
4
440
35
13
13
37
1.83
13618--13832
109
2.0
109
84
1
279
31
13
7
46
1.72
13447--14011
281
2.0
281
86
2
778
34
13
12
40
1.81
13728--14638
171
5.3
170
79
7
941
35
14
11
37
1.83
13728--14638
342
2.7
342
84
3
1224
35
14
11
37
1.83

Tables:   1

The End!