Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403269.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_943.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16277

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2095--2723
171
3.7
170
77
5
495
39
11
12
35
1.79
4297--4835
172
3.1
170
83
6
642
40
11
12
35
1.80
7109--7649
171
3.2
171
77
4
525
35
12
11
37
1.79
7907--9739
171
10.7
169
75
5
1077
34
13
11
36
1.81
10902--11246
170
2.0
169
84
3
453
34
14
11
39
1.82
11378--11721
169
2.0
169
82
4
415
35
12
11
40
1.80
11584--11866
145
1.9
147
82
4
349
37
12
10
39
1.79
12579--13186
172
3.6
168
83
3
752
36
13
10
39
1.80
13358--14250
170
5.3
169
75
6
738
35
12
10
38
1.79
13634--14229
330
1.8
321
82
4
682
36
13
11
37
1.80
15208--15687
170
2.8
171
82
2
511
37
11
13
36
1.80

Tables:   1

The End!