Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018403325.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_997.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17932

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2132--3195
171
6.2
171
71
6
587
35
12
10
37
1.77
3599--3901
161
1.9
161
81
2
376
36
14
10
34
1.81
5650--6709
170
6.3
169
75
6
671
37
10
12
36
1.77
6758--7442
170
4.0
170
73
5
508
36
10
13
35
1.79
7906--8484
171
3.4
171
80
2
617
37
10
14
35
1.80
10470--10956
171
2.8
171
78
2
496
35
10
14
35
1.80
11695--12003
170
1.8
170
80
4
381
40
8
14
35
1.77
12860--13757
171
5.3
167
74
5
486
35
10
13
34
1.80
14485--14814
171
2.0
159
80
8
358
36
10
13
36
1.78
16987--17788
170
4.7
169
73
4
563
36
9
13
34
1.78

Tables:   1

The End!