Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: NW_018397889.1 Herrania umbratica cultivar Fairchild unplaced genomic scaffold, ASM216827v2 scaffold_1193.0, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16540

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2953--3695
171
4.3
169
80
6
766
39
11
12
36
1.79
2953--3717
342
2.2
339
81
5
855
40
11
12
35
1.79
7296--7668
171
2.2
171
78
1
426
35
12
9
39
1.77
8471--8803
172
2.0
161
81
6
387
33
11
13
38
1.81
10146--10582
171
2.6
171
78
5
461
31
11
10
43
1.76
15262--15595
172
2.0
161
78
7
328
32
11
11
38
1.78

Tables:   1

The End!